Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm27397-201ENSMUST00000184997 107 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm29608-201ENSMUST00000190444 463 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm38294-201ENSMUST00000192831 381 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm43094-201ENSMUST00000196549 921 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28bQ8CEG5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Gm6447-201ENSMUST00000118905 835 ntBASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Gm7775-201ENSMUST00000218871 853 ntBASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms