Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc87Q8CDL9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.58□□□□□ -0.23
Ccdc87Q8CDL9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc87Q8CDL9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc87Q8CDL9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Gm14127-201ENSMUST00000117906 678 ntBASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc87Q8CDL9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms