Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Gm44651-201ENSMUST00000207343 372 ntBASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Ptcd1Q8C2E4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ptcd1Q8C2E4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ptcd1Q8C2E4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ptcd1Q8C2E4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ptcd1Q8C2E4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ptcd1Q8C2E4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ptcd1Q8C2E4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Ptcd1Q8C2E4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Gm13996-201ENSMUST00000118456 430 ntBASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Gm22121-201ENSMUST00000175148 54 ntBASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptcd1Q8C2E4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Gm38116-201ENSMUST00000193873 1533 ntBASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Mir874-201ENSMUST00000104769 76 ntBASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Gm27438-201ENSMUST00000183480 110 ntBASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Gm8712-201ENSMUST00000221090 701 ntBASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ptcd1Q8C2E4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Gm7593-201ENSMUST00000187246 644 ntBASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Gm19324-201ENSMUST00000213229 1169 ntBASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptcd1Q8C2E4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms