Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Gm18624-201ENSMUST00000220966 658 ntBASIC12.01□□□□□ -0.49
Vps9d1Q8C190 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.01□□□□□ -0.49
Vps9d1Q8C190 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Gm26315-201ENSMUST00000083890 321 ntBASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps9d1Q8C190 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12□□□□□ -0.49
Vps9d1Q8C190 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vps9d1Q8C190 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vps9d1Q8C190 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Matn2-203ENSMUST00000226766 3252 ntBASIC12□□□□□ -0.49
Vps9d1Q8C190 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vps9d1Q8C190 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vps9d1Q8C190 Gm15371-201ENSMUST00000117057 784 ntBASIC12□□□□□ -0.49
Vps9d1Q8C190 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12□□□□□ -0.49
Vps9d1Q8C190 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12□□□□□ -0.49
Vps9d1Q8C190 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12□□□□□ -0.49
Vps9d1Q8C190 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Gm45059-201ENSMUST00000205558 1077 ntBASIC12□□□□□ -0.49
Vps9d1Q8C190 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12□□□□□ -0.49
Vps9d1Q8C190 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Gm15163-201ENSMUST00000120749 1302 ntBASIC12□□□□□ -0.49
Vps9d1Q8C190 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12□□□□□ -0.49
Vps9d1Q8C190 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12□□□□□ -0.49
Vps9d1Q8C190 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12□□□□□ -0.49
Vps9d1Q8C190 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vps9d1Q8C190 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Gm10040-201ENSMUST00000080726 1662 ntBASIC12□□□□□ -0.49
Vps9d1Q8C190 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps9d1Q8C190 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Gm45384-201ENSMUST00000210451 277 ntBASIC11.99□□□□□ -0.49
Vps9d1Q8C190 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.99□□□□□ -0.49
Vps9d1Q8C190 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps9d1Q8C190 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms