Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trub1Q8C0D0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trub1Q8C0D0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trub1Q8C0D0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Gm17150-201ENSMUST00000165577 381 ntBASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Gm8602-201ENSMUST00000184045 607 ntBASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trub1Q8C0D0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Gm7063-201ENSMUST00000186840 981 ntBASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Gm10268-201ENSMUST00000085340 555 ntBASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trub1Q8C0D0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms