Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Rubie-203ENSMUST00000227803 2430 ntBASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Gm16296-201ENSMUST00000159905 325 ntBASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Gm40466-201ENSMUST00000212174 422 ntBASIC12.96□□□□□ -0.33
Usp43Q8BUM9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp43Q8BUM9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Usp43Q8BUM9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Usp43Q8BUM9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp43Q8BUM9 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.96□□□□□ -0.34
Usp43Q8BUM9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp43Q8BUM9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp43Q8BUM9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp43Q8BUM9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Usp43Q8BUM9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp43Q8BUM9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp43Q8BUM9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Gm12384-201ENSMUST00000119228 919 ntBASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms