Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.1□□□□□ -0.31
Nup54Q8BTS4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Gm29396-201ENSMUST00000185659 716 ntBASIC13.09□□□□□ -0.31
Nup54Q8BTS4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Gm10608-202ENSMUST00000213924 676 ntBASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.09□□□□□ -0.31
Nup54Q8BTS4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Gm22058-201ENSMUST00000083393 310 ntBASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup54Q8BTS4 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.08□□□□□ -0.31
Nup54Q8BTS4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup54Q8BTS4 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.08□□□□□ -0.31
Nup54Q8BTS4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup54Q8BTS4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Nup54Q8BTS4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup54Q8BTS4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Gm45331-201ENSMUST00000209868 554 ntBASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Gm18935-201ENSMUST00000212692 664 ntBASIC13.08□□□□□ -0.32
Nup54Q8BTS4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.08□□□□□ -0.32
Nup54Q8BTS4 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Gm7046-201ENSMUST00000221351 977 ntBASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.08□□□□□ -0.32
Nup54Q8BTS4 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup54Q8BTS4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms