Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.37□□□□□ -0.43
Cpne3Q8BT60 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Cpne3Q8BT60 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Gm5687-201ENSMUST00000118252 640 ntBASIC12.36□□□□□ -0.43
Cpne3Q8BT60 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Gm44069-201ENSMUST00000204898 506 ntBASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms