Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.27□□□□□ -0.45
SynbQ8BI41 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
SynbQ8BI41 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.45
SynbQ8BI41 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynbQ8BI41 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynbQ8BI41 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.27□□□□□ -0.45
SynbQ8BI41 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynbQ8BI41 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.27□□□□□ -0.45
SynbQ8BI41 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynbQ8BI41 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SynbQ8BI41 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynbQ8BI41 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynbQ8BI41 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynbQ8BI41 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.27□□□□□ -0.45
SynbQ8BI41 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynbQ8BI41 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynbQ8BI41 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Gm22323-201ENSMUST00000103832 109 ntBASIC12.26□□□□□ -0.45
SynbQ8BI41 Gm6023-201ENSMUST00000118217 606 ntBASIC12.26□□□□□ -0.45
SynbQ8BI41 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Gm27320-201ENSMUST00000184892 109 ntBASIC12.26□□□□□ -0.45
SynbQ8BI41 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.26□□□□□ -0.45
SynbQ8BI41 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.26□□□□□ -0.45
SynbQ8BI41 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SynbQ8BI41 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.26□□□□□ -0.45
SynbQ8BI41 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.26□□□□□ -0.45
SynbQ8BI41 Gm8227-201ENSMUST00000223306 571 ntBASIC12.26□□□□□ -0.45
SynbQ8BI41 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SynbQ8BI41 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.26□□□□□ -0.45
SynbQ8BI41 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynbQ8BI41 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SynbQ8BI41 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.25□□□□□ -0.45
SynbQ8BI41 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SynbQ8BI41 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.25□□□□□ -0.45
SynbQ8BI41 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SynbQ8BI41 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SynbQ8BI41 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.25□□□□□ -0.45
SynbQ8BI41 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
SynbQ8BI41 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.25□□□□□ -0.45
SynbQ8BI41 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.25□□□□□ -0.45
SynbQ8BI41 Gm14381-201ENSMUST00000122105 414 ntBASIC12.25□□□□□ -0.45
SynbQ8BI41 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.25□□□□□ -0.45
SynbQ8BI41 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SynbQ8BI41 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.25□□□□□ -0.45
SynbQ8BI41 Gm44069-201ENSMUST00000204898 506 ntBASIC12.25□□□□□ -0.45
SynbQ8BI41 Gm10608-202ENSMUST00000213924 676 ntBASIC12.25□□□□□ -0.45
SynbQ8BI41 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.25□□□□□ -0.45
SynbQ8BI41 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.25□□□□□ -0.45
SynbQ8BI41 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynbQ8BI41 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms