Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Slc5a7Q8BGY9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc5a7Q8BGY9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc5a7Q8BGY9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc5a7Q8BGY9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.2□□□□□ -0.62
Slc5a7Q8BGY9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Slc5a7Q8BGY9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc5a7Q8BGY9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc5a7Q8BGY9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc5a7Q8BGY9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm6415-201ENSMUST00000118488 348 ntBASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm14494-201ENSMUST00000118786 435 ntBASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm6447-201ENSMUST00000118905 835 ntBASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm27622-201ENSMUST00000183779 60 ntBASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm43474-201ENSMUST00000196415 774 ntBASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gm26035-201ENSMUST00000083065 308 ntBASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc5a7Q8BGY9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Gm8410-201ENSMUST00000117225 605 ntBASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Gm3436-201ENSMUST00000179930 840 ntBASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Gm5779-201ENSMUST00000218467 910 ntBASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms