Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gm12384-201ENSMUST00000119228 919 ntBASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gm11425-201ENSMUST00000119608 498 ntBASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gm27731-201ENSMUST00000185192 107 ntBASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gm43433-201ENSMUST00000196573 481 ntBASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gm8099-201ENSMUST00000200510 742 ntBASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gm9396-201ENSMUST00000076703 567 ntBASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Atg4bQ8BGE6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Gm13226-201ENSMUST00000117838 404 ntBASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Gm23363-201ENSMUST00000175024 79 ntBASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Gm45784-201ENSMUST00000188360 142 ntBASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4bQ8BGE6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atg4bQ8BGE6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms