Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Gm7046-201ENSMUST00000221351 977 ntBASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh8Q7TSK3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh8Q7TSK3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Pcdh8Q7TSK3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh8Q7TSK3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh8Q7TSK3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh8Q7TSK3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh8Q7TSK3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gm10434-201ENSMUST00000101158 471 ntBASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gm27320-201ENSMUST00000184892 109 ntBASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gm6621-201ENSMUST00000193251 772 ntBASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh8Q7TSK3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms