Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Gm12291-201ENSMUST00000121627 311 ntBASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Gm5354-201ENSMUST00000182417 973 ntBASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Gm27989-201ENSMUST00000184721 107 ntBASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Gm6458-201ENSMUST00000211573 635 ntBASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Gm27390-201ENSMUST00000184516 176 ntBASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Gm27838-201ENSMUST00000184829 128 ntBASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Gm44069-201ENSMUST00000204898 506 ntBASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scaf4Q6PFF0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Gm22189-201ENSMUST00000103822 86 ntBASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Gm16202-201ENSMUST00000117532 544 ntBASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Gm24694-201ENSMUST00000180054 110 ntBASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Gm27663-201ENSMUST00000184839 110 ntBASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.6□□□□□ -0.39
Scaf4Q6PFF0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms