Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Gm15370-201ENSMUST00000117158 253 ntBASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Gm37489-201ENSMUST00000191883 159 ntBASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc46a1Q6PEM8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Gm13786-201ENSMUST00000122371 333 ntBASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Gm2991-201ENSMUST00000173338 480 ntBASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Gm38158-201ENSMUST00000194617 339 ntBASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Gm38341-201ENSMUST00000195357 515 ntBASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Gm43758-201ENSMUST00000199500 367 ntBASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Slc46a1Q6PEM8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms