Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Gm16166-201ENSMUST00000118291 787 ntBASIC19.34■□□□□ 0.69
Slx4Q6P1D7 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Gm44958-201ENSMUST00000203734 736 ntBASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Gm45342-201ENSMUST00000210903 1363 ntBASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slx4Q6P1D7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Gm3765-201ENSMUST00000130985 1447 ntBASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Gm13047-201ENSMUST00000117116 815 ntBASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Gm14314-201ENSMUST00000118225 1015 ntBASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Gm23771-201ENSMUST00000178702 110 ntBASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slx4Q6P1D7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC19.33■□□□□ 0.68
Slx4Q6P1D7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slx4Q6P1D7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slx4Q6P1D7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slx4Q6P1D7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slx4Q6P1D7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC19.33■□□□□ 0.68
Slx4Q6P1D7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slx4Q6P1D7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slx4Q6P1D7 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Gm23218-201ENSMUST00000158124 276 ntBASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Gm7395-201ENSMUST00000216059 1045 ntBASIC19.32■□□□□ 0.68
Slx4Q6P1D7 AC154176.1-201ENSMUST00000225897 220 ntBASIC19.32■□□□□ 0.68
Slx4Q6P1D7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Gm16071-201ENSMUST00000119589 793 ntBASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Gm17826-201ENSMUST00000189720 798 ntBASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Slx4Q6P1D7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Slx4Q6P1D7 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms