Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gm8805-201ENSMUST00000117848 313 ntBASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gm24196-201ENSMUST00000179161 110 ntBASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Gm6091-201ENSMUST00000098307 165 ntBASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Gm11978-201ENSMUST00000122315 466 ntBASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Gm24644-201ENSMUST00000157114 139 ntBASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Gm17150-201ENSMUST00000165577 381 ntBASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Gm28693-202ENSMUST00000190758 331 ntBASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ParpbpQ6IRT3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Gm13829-201ENSMUST00000119600 138 ntBASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms