Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sdc3Q64519 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.34□□□□□ -0.43
Sdc3Q64519 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Gm38002-201ENSMUST00000193255 180 ntBASIC12.34□□□□□ -0.43
Sdc3Q64519 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Gm19163-201ENSMUST00000223313 780 ntBASIC12.34□□□□□ -0.43
Sdc3Q64519 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Gm7399-201ENSMUST00000032395 858 ntBASIC12.34□□□□□ -0.43
Sdc3Q64519 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.34□□□□□ -0.43
Sdc3Q64519 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Sdc3Q64519 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.34□□□□□ -0.43
Sdc3Q64519 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.34□□□□□ -0.43
Sdc3Q64519 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc3Q64519 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sdc3Q64519 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sdc3Q64519 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sdc3Q64519 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sdc3Q64519 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sdc3Q64519 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.33□□□□□ -0.44
Sdc3Q64519 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Sdc3Q64519 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.33□□□□□ -0.44
Sdc3Q64519 Gm11978-201ENSMUST00000122315 466 ntBASIC12.33□□□□□ -0.44
Sdc3Q64519 Gm25261-201ENSMUST00000157416 134 ntBASIC12.33□□□□□ -0.44
Sdc3Q64519 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.33□□□□□ -0.44
Sdc3Q64519 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.33□□□□□ -0.44
Sdc3Q64519 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.33□□□□□ -0.44
Sdc3Q64519 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.33□□□□□ -0.44
Sdc3Q64519 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.33□□□□□ -0.44
Sdc3Q64519 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sdc3Q64519 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.33□□□□□ -0.44
Sdc3Q64519 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.33□□□□□ -0.44
Sdc3Q64519 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc3Q64519 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sdc3Q64519 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms