Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.57□□□□□ -0.4
Irf4Q64287 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.57□□□□□ -0.4
Irf4Q64287 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.57□□□□□ -0.4
Irf4Q64287 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Irf4Q64287 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Irf4Q64287 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.56□□□□□ -0.4
Irf4Q64287 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Irf4Q64287 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Gm11964-201ENSMUST00000120982 444 ntBASIC12.56□□□□□ -0.4
Irf4Q64287 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Irf4Q64287 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.56□□□□□ -0.4
Irf4Q64287 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Irf4Q64287 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.56□□□□□ -0.4
Irf4Q64287 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.56□□□□□ -0.4
Irf4Q64287 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Irf4Q64287 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.56□□□□□ -0.4
Irf4Q64287 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.56□□□□□ -0.4
Irf4Q64287 Gm9257-201ENSMUST00000221254 232 ntBASIC12.56□□□□□ -0.4
Irf4Q64287 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.56□□□□□ -0.4
Irf4Q64287 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Irf4Q64287 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Irf4Q64287 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Irf4Q64287 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.56□□□□□ -0.4
Irf4Q64287 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Irf4Q64287 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Irf4Q64287 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.56□□□□□ -0.4
Irf4Q64287 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Irf4Q64287 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Irf4Q64287 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Irf4Q64287 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Irf4Q64287 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.55□□□□□ -0.4
Irf4Q64287 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Irf4Q64287 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.55□□□□□ -0.4
Irf4Q64287 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.55□□□□□ -0.4
Irf4Q64287 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Irf4Q64287 Gm13813-201ENSMUST00000120998 787 ntBASIC12.55□□□□□ -0.4
Irf4Q64287 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.55□□□□□ -0.4
Irf4Q64287 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Irf4Q64287 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Irf4Q64287 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Irf4Q64287 Gm27243-201ENSMUST00000183964 521 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms