Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
AtmQ62388 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
AtmQ62388 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.8□□□□□ -0.52
AtmQ62388 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.8□□□□□ -0.52
AtmQ62388 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Gm37852-201ENSMUST00000193027 350 ntBASIC11.8□□□□□ -0.52
AtmQ62388 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.8□□□□□ -0.52
AtmQ62388 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
AtmQ62388 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
AtmQ62388 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.79□□□□□ -0.52
AtmQ62388 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.79□□□□□ -0.52
AtmQ62388 Gm37458-201ENSMUST00000194055 410 ntBASIC11.79□□□□□ -0.52
AtmQ62388 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.79□□□□□ -0.52
AtmQ62388 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
AtmQ62388 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.79□□□□□ -0.52
AtmQ62388 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.79□□□□□ -0.52
AtmQ62388 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
AtmQ62388 Gm18304-201ENSMUST00000189162 546 ntBASIC11.79□□□□□ -0.52
AtmQ62388 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.79□□□□□ -0.52
AtmQ62388 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
AtmQ62388 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.79□□□□□ -0.52
AtmQ62388 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.79□□□□□ -0.52
AtmQ62388 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AtmQ62388 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
AtmQ62388 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.78□□□□□ -0.52
AtmQ62388 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.78□□□□□ -0.52
AtmQ62388 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.78□□□□□ -0.52
AtmQ62388 Gm5100-201ENSMUST00000195631 589 ntBASIC11.78□□□□□ -0.52
AtmQ62388 Gm42433-201ENSMUST00000196806 940 ntBASIC11.78□□□□□ -0.52
AtmQ62388 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.78□□□□□ -0.52
AtmQ62388 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.78□□□□□ -0.52
AtmQ62388 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
AtmQ62388 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.78□□□□□ -0.52
AtmQ62388 Gm22711-201ENSMUST00000116890 133 ntBASIC11.78□□□□□ -0.52
AtmQ62388 Gm14724-201ENSMUST00000118400 537 ntBASIC11.78□□□□□ -0.52
AtmQ62388 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Gm20414-201ENSMUST00000172918 646 ntBASIC11.78□□□□□ -0.52
AtmQ62388 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
AtmQ62388 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
AtmQ62388 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.78□□□□□ -0.52
AtmQ62388 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
AtmQ62388 Gm9507-202ENSMUST00000180157 654 ntBASIC11.78□□□□□ -0.52
AtmQ62388 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
AtmQ62388 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
AtmQ62388 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms