Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Foxc1Q61572 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Foxc1Q61572 Mir706-201ENSMUST00000102262 84 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.65□□□□□ -0.86
Foxc1Q61572 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm8582-201ENSMUST00000164061 789 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm6047-201ENSMUST00000167221 574 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm28064-201ENSMUST00000185639 858 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm28195-201ENSMUST00000186992 372 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm38144-201ENSMUST00000192790 465 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm5717-201ENSMUST00000198243 1062 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm43952-201ENSMUST00000203765 751 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm18041-201ENSMUST00000218210 618 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm17794-201ENSMUST00000220252 955 ntBASIC9.65□□□□□ -0.86
Foxc1Q61572 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Foxc1Q61572 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Foxc1Q61572 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC9.65□□□□□ -0.86
Foxc1Q61572 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
Foxc1Q61572 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.65□□□□□ -0.87
Foxc1Q61572 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Foxc1Q61572 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Foxc1Q61572 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Foxc1Q61572 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Foxc1Q61572 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Foxc1Q61572 Gm45832-201ENSMUST00000212762 1443 ntBASIC9.65□□□□□ -0.87
Foxc1Q61572 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Foxc1Q61572 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Foxc1Q61572 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Foxc1Q61572 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Foxc1Q61572 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.64□□□□□ -0.87
Foxc1Q61572 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.64□□□□□ -0.87
Foxc1Q61572 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.64□□□□□ -0.87
Foxc1Q61572 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm20778-201ENSMUST00000178524 627 ntBASIC9.64□□□□□ -0.87
Foxc1Q61572 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm42550-201ENSMUST00000201553 960 ntBASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm43761-201ENSMUST00000202132 991 ntBASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC9.64□□□□□ -0.87
Foxc1Q61572 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 AC160962.2-201ENSMUST00000224761 632 ntBASIC9.64□□□□□ -0.87
Foxc1Q61572 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Foxc1Q61572 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Foxc1Q61572 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms