Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.32□□□□□ -0.28
Smarcd1Q61466 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcd1Q61466 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Gm2991-201ENSMUST00000173338 480 ntBASIC13.32□□□□□ -0.28
Smarcd1Q61466 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Gm44364-201ENSMUST00000198368 141 ntBASIC13.32□□□□□ -0.28
Smarcd1Q61466 Gm6334-201ENSMUST00000207083 228 ntBASIC13.32□□□□□ -0.28
Smarcd1Q61466 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Gm45925-201ENSMUST00000218882 744 ntBASIC13.32□□□□□ -0.28
Smarcd1Q61466 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcd1Q61466 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.31□□□□□ -0.28
Smarcd1Q61466 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.31□□□□□ -0.28
Smarcd1Q61466 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Mir6420-201ENSMUST00000185032 102 ntBASIC13.31□□□□□ -0.28
Smarcd1Q61466 Gm6621-201ENSMUST00000193251 772 ntBASIC13.31□□□□□ -0.28
Smarcd1Q61466 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcd1Q61466 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.31□□□□□ -0.28
Smarcd1Q61466 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.31□□□□□ -0.28
Smarcd1Q61466 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd1Q61466 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd1Q61466 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms