Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ClpbQ60649 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.31□□□□□ -0.44
ClpbQ60649 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ClpbQ60649 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.31□□□□□ -0.44
ClpbQ60649 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ClpbQ60649 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.3□□□□□ -0.44
ClpbQ60649 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.3□□□□□ -0.44
ClpbQ60649 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.3□□□□□ -0.44
ClpbQ60649 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.3□□□□□ -0.44
ClpbQ60649 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ClpbQ60649 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.3□□□□□ -0.44
ClpbQ60649 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.3□□□□□ -0.44
ClpbQ60649 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.3□□□□□ -0.44
ClpbQ60649 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.3□□□□□ -0.44
ClpbQ60649 Gm43630-201ENSMUST00000201550 776 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
ClpbQ60649 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.3□□□□□ -0.44
ClpbQ60649 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClpbQ60649 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ClpbQ60649 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
ClpbQ60649 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ClpbQ60649 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.29□□□□□ -0.44
ClpbQ60649 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ClpbQ60649 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ClpbQ60649 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.29□□□□□ -0.44
ClpbQ60649 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.29□□□□□ -0.44
ClpbQ60649 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.29□□□□□ -0.44
ClpbQ60649 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.29□□□□□ -0.44
ClpbQ60649 Gm5370-201ENSMUST00000187187 574 ntBASIC12.29□□□□□ -0.44
ClpbQ60649 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.29□□□□□ -0.44
ClpbQ60649 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms