Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 AC139350.3-201ENSMUST00000226151 420 ntBASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Gm18165-201ENSMUST00000217426 928 ntBASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3-3Q5R1C3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Trav3-3Q5R1C3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms