Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm11509-201ENSMUST00000117358 325 ntBASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vps13aQ5H8C4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vps13aQ5H8C4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Gm8737-201ENSMUST00000122208 642 ntBASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Gm23675-201ENSMUST00000157311 125 ntBASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Gm9166-201ENSMUST00000120293 561 ntBASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Gm24248-201ENSMUST00000157321 322 ntBASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Gm26368-201ENSMUST00000157826 118 ntBASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Gm3283-201ENSMUST00000199319 1350 ntBASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps13aQ5H8C4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Mir6407-201ENSMUST00000184510 101 ntBASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm5298-201ENSMUST00000201122 892 ntBASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm26448-201ENSMUST00000082446 203 ntBASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm25063-201ENSMUST00000104666 94 ntBASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps13aQ5H8C4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms