Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm45224-201ENSMUST00000208203 414 ntBASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm13996-201ENSMUST00000118456 430 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm12058-201ENSMUST00000118614 437 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm13492-201ENSMUST00000119772 665 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm38092-201ENSMUST00000195600 653 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm8099-201ENSMUST00000200510 742 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm45118-201ENSMUST00000208928 825 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ddx49Q4FZF3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx49Q4FZF3 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Gm12616-201ENSMUST00000118594 382 ntBASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Gm12624-201ENSMUST00000177615 382 ntBASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Gm12621-201ENSMUST00000177760 382 ntBASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Gm12615-201ENSMUST00000177970 382 ntBASIC14.9□□□□□ -0.02
Ddx49Q4FZF3 Gm12622-201ENSMUST00000177975 382 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms