Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc27Q3V036 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Map1b-203ENSMUST00000223725 2669 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm15371-201ENSMUST00000117057 784 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm27437-201ENSMUST00000183429 107 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm18307-201ENSMUST00000206864 949 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm27177-202ENSMUST00000183514 2703 ntBASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc27Q3V036 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC16.33■□□□□ 0.21
Ccdc27Q3V036 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC16.33■□□□□ 0.21
Ccdc27Q3V036 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc27Q3V036 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc27Q3V036 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ccdc27Q3V036 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc27Q3V036 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc27Q3V036 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Gm5866-201ENSMUST00000177881 973 ntBASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Gm18983-201ENSMUST00000222884 2729 ntBASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc27Q3V036 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms