Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Gm14460-201ENSMUST00000121511 639 ntBASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Gm12164-201ENSMUST00000121695 551 ntBASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Gm4607-201ENSMUST00000206649 577 ntBASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Gm4797-201ENSMUST00000219075 1283 ntBASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Gm1821-202ENSMUST00000227415 750 ntBASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 AC124457.1-201ENSMUST00000198845 120 ntBASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Ginm1-202ENSMUST00000065124 300 ntBASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Arhgef40Q3UPH7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Gm12795-201ENSMUST00000117594 539 ntBASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Gm7722-201ENSMUST00000120646 741 ntBASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Gm5733-201ENSMUST00000190232 939 ntBASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Gm37246-201ENSMUST00000192665 835 ntBASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Gm25517-201ENSMUST00000083865 134 ntBASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Gm44065-201ENSMUST00000203184 3527 ntBASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC18.47■□□□□ 0.55
Arhgef40Q3UPH7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Gm9785-201ENSMUST00000062642 1006 ntBASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Arhgef40Q3UPH7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Arhgef40Q3UPH7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Arhgef40Q3UPH7 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC18.46■□□□□ 0.54
Arhgef40Q3UPH7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC18.45■□□□□ 0.54
Arhgef40Q3UPH7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Arhgef40Q3UPH7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Arhgef40Q3UPH7 Gm9072-201ENSMUST00000218390 1514 ntBASIC18.45■□□□□ 0.54
Arhgef40Q3UPH7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Arhgef40Q3UPH7 Gm15595-201ENSMUST00000120840 961 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms