Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm14704-201ENSMUST00000120300 874 ntBASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm10156-201ENSMUST00000122364 462 ntBASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm22121-201ENSMUST00000175148 54 ntBASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm27437-201ENSMUST00000183429 107 ntBASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm19184-201ENSMUST00000196798 928 ntBASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.42□□□□□ -0.26
Cul4aQ3TCH7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Gm8805-201ENSMUST00000117848 313 ntBASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Gm27701-201ENSMUST00000184498 110 ntBASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cul4aQ3TCH7 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Snord83b-201ENSMUST00000104546 94 ntBASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Gm8213-201ENSMUST00000118191 441 ntBASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Gm27390-201ENSMUST00000184516 176 ntBASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cul4aQ3TCH7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms