Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.49□□□□□ -0.73
Trim63Q38HM4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.48□□□□□ -0.73
Trim63Q38HM4 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Mir3081-201ENSMUST00000175305 84 ntBASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm22119-201ENSMUST00000175594 99 ntBASIC10.48□□□□□ -0.73
Trim63Q38HM4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm18246-201ENSMUST00000221023 728 ntBASIC10.48□□□□□ -0.73
Trim63Q38HM4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.48□□□□□ -0.73
Trim63Q38HM4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.48□□□□□ -0.73
Trim63Q38HM4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim63Q38HM4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.47□□□□□ -0.73
Trim63Q38HM4 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.47□□□□□ -0.73
Trim63Q38HM4 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.47□□□□□ -0.73
Trim63Q38HM4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms