Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox4Q06831 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox4Q06831 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox4Q06831 Gm13813-201ENSMUST00000120998 787 ntBASIC12.6□□□□□ -0.39
Sox4Q06831 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.6□□□□□ -0.39
Sox4Q06831 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.6□□□□□ -0.39
Sox4Q06831 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox4Q06831 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.6□□□□□ -0.39
Sox4Q06831 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sox4Q06831 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Sox4Q06831 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sox4Q06831 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox4Q06831 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sox4Q06831 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox4Q06831 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.59□□□□□ -0.39
Sox4Q06831 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Sox4Q06831 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox4Q06831 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.59□□□□□ -0.39
Sox4Q06831 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Sox4Q06831 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox4Q06831 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sox4Q06831 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sox4Q06831 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sox4Q06831 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.59□□□□□ -0.39
Sox4Q06831 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sox4Q06831 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox4Q06831 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Sox4Q06831 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Sox4Q06831 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.59□□□□□ -0.39
Sox4Q06831 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox4Q06831 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox4Q06831 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox4Q06831 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Sox4Q06831 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Gm6023-201ENSMUST00000118217 606 ntBASIC12.58□□□□□ -0.4
Sox4Q06831 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.58□□□□□ -0.4
Sox4Q06831 Mir1938-201ENSMUST00000158746 100 ntBASIC12.58□□□□□ -0.4
Sox4Q06831 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Gm43118-201ENSMUST00000199149 775 ntBASIC12.58□□□□□ -0.4
Sox4Q06831 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox4Q06831 Gm5781-201ENSMUST00000219792 443 ntBASIC12.58□□□□□ -0.4
Sox4Q06831 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox4Q06831 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox4Q06831 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.58□□□□□ -0.4
Sox4Q06831 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox4Q06831 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox4Q06831 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.58□□□□□ -0.4
Sox4Q06831 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms