Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm28693-202ENSMUST00000190758 331 ntBASIC12.89□□□□□ -0.35
Pfdn6Q03958 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.89□□□□□ -0.35
Pfdn6Q03958 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.89□□□□□ -0.35
Pfdn6Q03958 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.89□□□□□ -0.35
Pfdn6Q03958 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.88□□□□□ -0.35
Pfdn6Q03958 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Mir686-201ENSMUST00000102174 109 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 Gm27892-201ENSMUST00000185017 106 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 Gm37922-201ENSMUST00000195596 455 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.88□□□□□ -0.35
Pfdn6Q03958 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pfdn6Q03958 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Gm10156-201ENSMUST00000122364 462 ntBASIC12.87□□□□□ -0.35
Pfdn6Q03958 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Gm6244-201ENSMUST00000178732 841 ntBASIC12.87□□□□□ -0.35
Pfdn6Q03958 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Gm27486-201ENSMUST00000184923 80 ntBASIC12.87□□□□□ -0.35
Pfdn6Q03958 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Gm9794-201ENSMUST00000202370 423 ntBASIC12.87□□□□□ -0.35
Pfdn6Q03958 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pfdn6Q03958 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pfdn6Q03958 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms