Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Lig3P97386 Gm10608-202ENSMUST00000213924 676 ntBASIC14.02□□□□□ -0.17
Lig3P97386 Gm6082-201ENSMUST00000215204 454 ntBASIC14.02□□□□□ -0.17
Lig3P97386 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Lig3P97386 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Lig3P97386 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lig3P97386 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.01□□□□□ -0.17
Lig3P97386 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lig3P97386 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Lig3P97386 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.01□□□□□ -0.17
Lig3P97386 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lig3P97386 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lig3P97386 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.01□□□□□ -0.17
Lig3P97386 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Lig3P97386 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.01□□□□□ -0.17
Lig3P97386 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.01□□□□□ -0.17
Lig3P97386 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.01□□□□□ -0.17
Lig3P97386 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Lig3P97386 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lig3P97386 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.01□□□□□ -0.17
Lig3P97386 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14□□□□□ -0.17
Lig3P97386 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14□□□□□ -0.17
Lig3P97386 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14□□□□□ -0.17
Lig3P97386 Gm20482-202ENSMUST00000174729 825 ntBASIC14□□□□□ -0.17
Lig3P97386 Gm3809-201ENSMUST00000180973 1006 ntBASIC14□□□□□ -0.17
Lig3P97386 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Gm29741-201ENSMUST00000192667 421 ntBASIC14□□□□□ -0.17
Lig3P97386 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14□□□□□ -0.17
Lig3P97386 Gm8227-201ENSMUST00000223306 571 ntBASIC14□□□□□ -0.17
Lig3P97386 Gm2824-203ENSMUST00000226189 1228 ntBASIC14□□□□□ -0.17
Lig3P97386 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lig3P97386 Mir497b-201ENSMUST00000093601 125 ntBASIC14□□□□□ -0.17
Lig3P97386 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lig3P97386 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.99□□□□□ -0.17
Lig3P97386 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lig3P97386 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.99□□□□□ -0.17
Lig3P97386 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms