Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gbx1P82976 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Gbx1P82976 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gbx1P82976 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gbx1P82976 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.02□□□□□ -0.49
Gbx1P82976 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Gm7287-201ENSMUST00000205267 602 ntBASIC12.02□□□□□ -0.49
Gbx1P82976 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.02□□□□□ -0.49
Gbx1P82976 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.02□□□□□ -0.49
Gbx1P82976 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.02□□□□□ -0.49
Gbx1P82976 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.02□□□□□ -0.49
Gbx1P82976 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gbx1P82976 Gm6180-201ENSMUST00000065243 498 ntBASIC12.02□□□□□ -0.49
Gbx1P82976 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Gbx1P82976 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.02□□□□□ -0.49
Gbx1P82976 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gbx1P82976 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.01□□□□□ -0.49
Gbx1P82976 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.01□□□□□ -0.49
Gbx1P82976 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.01□□□□□ -0.49
Gbx1P82976 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.01□□□□□ -0.49
Gbx1P82976 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.01□□□□□ -0.49
Gbx1P82976 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Gm12091-201ENSMUST00000146791 830 ntBASIC12.01□□□□□ -0.49
Gbx1P82976 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gbx1P82976 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Gm38671-201ENSMUST00000200573 130 ntBASIC12.01□□□□□ -0.49
Gbx1P82976 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.01□□□□□ -0.49
Gbx1P82976 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.01□□□□□ -0.49
Gbx1P82976 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gbx1P82976 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.01□□□□□ -0.49
Gbx1P82976 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.01□□□□□ -0.49
Gbx1P82976 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Gbx1P82976 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gbx1P82976 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gbx1P82976 Nupl1-206ENSMUST00000225111 2936 ntBASIC12□□□□□ -0.49
Gbx1P82976 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gbx1P82976 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gbx1P82976 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gbx1P82976 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Gbx1P82976 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12□□□□□ -0.49
Gbx1P82976 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gbx1P82976 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gbx1P82976 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gbx1P82976 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Gbx1P82976 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12□□□□□ -0.49
Gbx1P82976 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gbx1P82976 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms