Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf1P81269 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Gm8213-201ENSMUST00000118191 441 ntBASIC11.07□□□□□ -0.64
Atf1P81269 Gm14928-201ENSMUST00000120198 477 ntBASIC11.07□□□□□ -0.64
Atf1P81269 Gm11918-201ENSMUST00000121660 179 ntBASIC11.07□□□□□ -0.64
Atf1P81269 Gm13123-201ENSMUST00000122173 492 ntBASIC11.07□□□□□ -0.64
Atf1P81269 Gm10156-201ENSMUST00000122364 462 ntBASIC11.07□□□□□ -0.64
Atf1P81269 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.07□□□□□ -0.64
Atf1P81269 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf1P81269 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf1P81269 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf1P81269 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Atf1P81269 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf1P81269 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Atf1P81269 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Atf1P81269 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.07□□□□□ -0.64
Atf1P81269 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.07□□□□□ -0.64
Atf1P81269 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.07□□□□□ -0.64
Atf1P81269 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf1P81269 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Atf1P81269 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.06□□□□□ -0.64
Atf1P81269 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.06□□□□□ -0.64
Atf1P81269 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Atf1P81269 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Atf1P81269 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Atf1P81269 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.06□□□□□ -0.64
Atf1P81269 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Atf1P81269 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.06□□□□□ -0.64
Atf1P81269 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.06□□□□□ -0.64
Atf1P81269 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.06□□□□□ -0.64
Atf1P81269 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.06□□□□□ -0.64
Atf1P81269 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.06□□□□□ -0.64
Atf1P81269 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.06□□□□□ -0.64
Atf1P81269 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Gm37922-201ENSMUST00000195596 455 ntBASIC11.06□□□□□ -0.64
Atf1P81269 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf1P81269 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.06□□□□□ -0.64
Atf1P81269 Gm45384-201ENSMUST00000210451 277 ntBASIC11.06□□□□□ -0.64
Atf1P81269 Gm9908-201ENSMUST00000211534 448 ntBASIC11.06□□□□□ -0.64
Atf1P81269 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms