Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.87□□□□□ -0.19
CiitaP79621 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.86□□□□□ -0.19
CiitaP79621 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CiitaP79621 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CiitaP79621 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
CiitaP79621 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CiitaP79621 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CiitaP79621 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CiitaP79621 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.86□□□□□ -0.19
CiitaP79621 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.86□□□□□ -0.19
CiitaP79621 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.86□□□□□ -0.19
CiitaP79621 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.86□□□□□ -0.19
CiitaP79621 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CiitaP79621 Gm45925-201ENSMUST00000218882 744 ntBASIC13.86□□□□□ -0.19
CiitaP79621 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.86□□□□□ -0.19
CiitaP79621 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CiitaP79621 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CiitaP79621 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CiitaP79621 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CiitaP79621 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CiitaP79621 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.86□□□□□ -0.19
CiitaP79621 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CiitaP79621 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CiitaP79621 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.86□□□□□ -0.19
CiitaP79621 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CiitaP79621 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.85□□□□□ -0.19
CiitaP79621 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CiitaP79621 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.85□□□□□ -0.19
CiitaP79621 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.85□□□□□ -0.19
CiitaP79621 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CiitaP79621 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.85□□□□□ -0.19
CiitaP79621 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.85□□□□□ -0.19
CiitaP79621 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.85□□□□□ -0.19
CiitaP79621 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CiitaP79621 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CiitaP79621 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CiitaP79621 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CiitaP79621 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.85□□□□□ -0.19
CiitaP79621 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CiitaP79621 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CiitaP79621 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CiitaP79621 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.84□□□□□ -0.19
CiitaP79621 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.84□□□□□ -0.19
CiitaP79621 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.84□□□□□ -0.19
CiitaP79621 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CiitaP79621 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.84□□□□□ -0.19
CiitaP79621 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.84□□□□□ -0.19
CiitaP79621 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.84□□□□□ -0.19
CiitaP79621 Gm38241-201ENSMUST00000192641 898 ntBASIC13.84□□□□□ -0.19
CiitaP79621 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.84□□□□□ -0.19
CiitaP79621 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.84□□□□□ -0.19
CiitaP79621 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.84□□□□□ -0.19
CiitaP79621 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.84□□□□□ -0.19
CiitaP79621 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CiitaP79621 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CiitaP79621 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.84□□□□□ -0.19
CiitaP79621 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CiitaP79621 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms