Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Six5P70178 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Gm10339-203ENSMUST00000225409 1671 ntBASIC12□□□□□ -0.49
Six5P70178 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12□□□□□ -0.49
Six5P70178 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Six5P70178 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.99□□□□□ -0.49
Six5P70178 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.99□□□□□ -0.49
Six5P70178 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Six5P70178 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Six5P70178 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Six5P70178 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Six5P70178 Snord83b-201ENSMUST00000104546 94 ntBASIC11.99□□□□□ -0.49
Six5P70178 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.99□□□□□ -0.49
Six5P70178 Gm12384-201ENSMUST00000119228 919 ntBASIC11.99□□□□□ -0.49
Six5P70178 Gm15824-201ENSMUST00000119516 955 ntBASIC11.99□□□□□ -0.49
Six5P70178 Gm1335-201ENSMUST00000121653 386 ntBASIC11.99□□□□□ -0.49
Six5P70178 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.99□□□□□ -0.49
Six5P70178 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.99□□□□□ -0.49
Six5P70178 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.99□□□□□ -0.49
Six5P70178 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.99□□□□□ -0.49
Six5P70178 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.99□□□□□ -0.49
Six5P70178 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.99□□□□□ -0.49
Six5P70178 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.99□□□□□ -0.49
Six5P70178 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Six5P70178 Gm10268-201ENSMUST00000085340 555 ntBASIC11.99□□□□□ -0.49
Six5P70178 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Six5P70178 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.99□□□□□ -0.49
Six5P70178 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Six5P70178 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Six5P70178 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Six5P70178 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.98□□□□□ -0.49
Six5P70178 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Six5P70178 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Six5P70178 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.98□□□□□ -0.49
Six5P70178 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Six5P70178 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.98□□□□□ -0.49
Six5P70178 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Six5P70178 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Six5P70178 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.98□□□□□ -0.49
Six5P70178 Gm12363-201ENSMUST00000122250 668 ntBASIC11.98□□□□□ -0.49
Six5P70178 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.98□□□□□ -0.49
Six5P70178 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.98□□□□□ -0.49
Six5P70178 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.98□□□□□ -0.49
Six5P70178 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Gm43433-201ENSMUST00000196573 481 ntBASIC11.98□□□□□ -0.49
Six5P70178 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.98□□□□□ -0.49
Six5P70178 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Six5P70178 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms