Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hmgb1P63158 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmgb1P63158 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hmgb1P63158 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Hmgb1P63158 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.11□□□□□ -0.15
Hmgb1P63158 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.11□□□□□ -0.15
Hmgb1P63158 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Hmgb1P63158 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hmgb1P63158 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hmgb1P63158 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hmgb1P63158 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgb1P63158 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hmgb1P63158 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hmgb1P63158 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.1□□□□□ -0.15
Hmgb1P63158 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Hmgb1P63158 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.1□□□□□ -0.15
Hmgb1P63158 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.1□□□□□ -0.15
Hmgb1P63158 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.1□□□□□ -0.15
Hmgb1P63158 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb1P63158 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Hmgb1P63158 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb1P63158 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Gm8213-201ENSMUST00000118191 441 ntBASIC14.09□□□□□ -0.15
Hmgb1P63158 Gm14921-201ENSMUST00000118643 908 ntBASIC14.09□□□□□ -0.15
Hmgb1P63158 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb1P63158 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb1P63158 Gm10576-201ENSMUST00000191927 825 ntBASIC14.09□□□□□ -0.15
Hmgb1P63158 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb1P63158 Gm7287-201ENSMUST00000205267 602 ntBASIC14.09□□□□□ -0.15
Hmgb1P63158 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb1P63158 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.09□□□□□ -0.15
Hmgb1P63158 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.09□□□□□ -0.15
Hmgb1P63158 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb1P63158 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb1P63158 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hmgb1P63158 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Hmgb1P63158 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb1P63158 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Hmgb1P63158 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgb1P63158 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms