Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.1□□□□□ -0.47
Nup43P59235 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.1□□□□□ -0.47
Nup43P59235 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.1□□□□□ -0.47
Nup43P59235 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.1□□□□□ -0.47
Nup43P59235 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.1□□□□□ -0.47
Nup43P59235 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Snora73a-201ENSMUST00000082453 205 ntBASIC12.1□□□□□ -0.47
Nup43P59235 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nup43P59235 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.1□□□□□ -0.47
Nup43P59235 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.1□□□□□ -0.47
Nup43P59235 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.09□□□□□ -0.47
Nup43P59235 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Nup43P59235 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.09□□□□□ -0.47
Nup43P59235 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.09□□□□□ -0.47
Nup43P59235 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Nup43P59235 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.09□□□□□ -0.47
Nup43P59235 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.09□□□□□ -0.47
Nup43P59235 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.09□□□□□ -0.47
Nup43P59235 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nup43P59235 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.09□□□□□ -0.47
Nup43P59235 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.09□□□□□ -0.47
Nup43P59235 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Nup43P59235 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Nup43P59235 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nup43P59235 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nup43P59235 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.09□□□□□ -0.47
Nup43P59235 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.09□□□□□ -0.47
Nup43P59235 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Nup43P59235 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup43P59235 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nup43P59235 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.08□□□□□ -0.48
Nup43P59235 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.08□□□□□ -0.48
Nup43P59235 Gm25261-201ENSMUST00000157416 134 ntBASIC12.08□□□□□ -0.48
Nup43P59235 Gm27514-201ENSMUST00000183692 110 ntBASIC12.08□□□□□ -0.48
Nup43P59235 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.08□□□□□ -0.48
Nup43P59235 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.08□□□□□ -0.48
Nup43P59235 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nup43P59235 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nup43P59235 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nup43P59235 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nup43P59235 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup43P59235 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Nup43P59235 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nup43P59235 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Nup43P59235 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms