Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.25□□□□□ -0.45
Cdkn2bP55271 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.24□□□□□ -0.45
Cdkn2bP55271 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Gm14921-201ENSMUST00000118643 908 ntBASIC12.24□□□□□ -0.45
Cdkn2bP55271 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.24□□□□□ -0.45
Cdkn2bP55271 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkn2bP55271 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.23□□□□□ -0.45
Cdkn2bP55271 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.23□□□□□ -0.45
Cdkn2bP55271 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Gm27390-201ENSMUST00000184516 176 ntBASIC12.23□□□□□ -0.45
Cdkn2bP55271 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Gm2495-201ENSMUST00000191160 466 ntBASIC12.23□□□□□ -0.45
Cdkn2bP55271 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Gm44855-201ENSMUST00000205725 362 ntBASIC12.23□□□□□ -0.45
Cdkn2bP55271 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn2bP55271 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn2bP55271 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms