Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nub1P54729 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nub1P54729 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nub1P54729 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nub1P54729 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nub1P54729 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nub1P54729 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Nub1P54729 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.82□□□□□ -0.2
Nub1P54729 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nub1P54729 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nub1P54729 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.81□□□□□ -0.2
Nub1P54729 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nub1P54729 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.81□□□□□ -0.2
Nub1P54729 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Paupar-201ENSMUST00000194826 3482 ntBASIC13.81□□□□□ -0.2
Nub1P54729 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nub1P54729 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
Nub1P54729 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Nub1P54729 Gm14660-201ENSMUST00000119809 575 ntBASIC13.81□□□□□ -0.2
Nub1P54729 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.81□□□□□ -0.2
Nub1P54729 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.81□□□□□ -0.2
Nub1P54729 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nub1P54729 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nub1P54729 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.81□□□□□ -0.2
Nub1P54729 Gm17208-201ENSMUST00000168388 535 ntBASIC13.81□□□□□ -0.2
Nub1P54729 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nub1P54729 Gm26927-201ENSMUST00000182385 965 ntBASIC13.81□□□□□ -0.2
Nub1P54729 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.81□□□□□ -0.2
Nub1P54729 Gm27731-201ENSMUST00000185192 107 ntBASIC13.81□□□□□ -0.2
Nub1P54729 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.81□□□□□ -0.2
Nub1P54729 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.81□□□□□ -0.2
Nub1P54729 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC13.81□□□□□ -0.2
Nub1P54729 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.81□□□□□ -0.2
Nub1P54729 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.81□□□□□ -0.2
Nub1P54729 Gm10268-201ENSMUST00000085340 555 ntBASIC13.81□□□□□ -0.2
Nub1P54729 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Nub1P54729 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.81□□□□□ -0.2
Nub1P54729 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.81□□□□□ -0.2
Nub1P54729 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.81□□□□□ -0.2
Nub1P54729 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.81□□□□□ -0.2
Nub1P54729 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nub1P54729 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.8□□□□□ -0.2
Nub1P54729 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nub1P54729 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Snord83b-201ENSMUST00000104546 94 ntBASIC13.8□□□□□ -0.2
Nub1P54729 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.8□□□□□ -0.2
Nub1P54729 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.8□□□□□ -0.2
Nub1P54729 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.8□□□□□ -0.2
Nub1P54729 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.8□□□□□ -0.2
Nub1P54729 Gm45784-201ENSMUST00000188360 142 ntBASIC13.8□□□□□ -0.2
Nub1P54729 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Nub1P54729 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.8□□□□□ -0.2
Nub1P54729 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nub1P54729 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nub1P54729 Gm25857-201ENSMUST00000082788 129 ntBASIC13.8□□□□□ -0.2
Nub1P54729 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.8□□□□□ -0.2
Nub1P54729 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Nub1P54729 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms