Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Msh6P54276 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.13■□□□□ 0.17
Msh6P54276 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Msh6P54276 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Msh6P54276 Gm11597-201ENSMUST00000121423 964 ntBASIC16.13■□□□□ 0.17
Msh6P54276 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.13■□□□□ 0.17
Msh6P54276 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.13■□□□□ 0.17
Msh6P54276 Gm18393-201ENSMUST00000208349 1131 ntBASIC16.13■□□□□ 0.17
Msh6P54276 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC16.13■□□□□ 0.17
Msh6P54276 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Msh6P54276 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Msh6P54276 Gm10312-201ENSMUST00000078515 489 ntBASIC16.13■□□□□ 0.17
Msh6P54276 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.12■□□□□ 0.17
Msh6P54276 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.12■□□□□ 0.17
Msh6P54276 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.12■□□□□ 0.17
Msh6P54276 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Msh6P54276 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.12■□□□□ 0.17
Msh6P54276 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.12■□□□□ 0.17
Msh6P54276 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.12■□□□□ 0.17
Msh6P54276 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Msh6P54276 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.12■□□□□ 0.17
Msh6P54276 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Msh6P54276 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Msh6P54276 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 Gm9550-201ENSMUST00000161130 862 ntBASIC16.12■□□□□ 0.17
Msh6P54276 Gm18734-201ENSMUST00000172937 808 ntBASIC16.12■□□□□ 0.17
Msh6P54276 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.12■□□□□ 0.17
Msh6P54276 Gm9211-201ENSMUST00000182882 975 ntBASIC16.12■□□□□ 0.17
Msh6P54276 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC16.12■□□□□ 0.17
Msh6P54276 AU022133-201ENSMUST00000200601 873 ntBASIC16.12■□□□□ 0.17
Msh6P54276 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.12■□□□□ 0.17
Msh6P54276 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh6P54276 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.11■□□□□ 0.17
Msh6P54276 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Msh6P54276 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC16.11■□□□□ 0.17
Msh6P54276 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.11■□□□□ 0.17
Msh6P54276 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.11■□□□□ 0.17
Msh6P54276 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.11■□□□□ 0.17
Msh6P54276 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.11■□□□□ 0.17
Msh6P54276 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Msh6P54276 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Msh6P54276 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.11■□□□□ 0.17
Msh6P54276 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Gm12266-201ENSMUST00000120311 962 ntBASIC16.11■□□□□ 0.17
Msh6P54276 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC16.11■□□□□ 0.17
Msh6P54276 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Msh6P54276 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.11■□□□□ 0.17
Msh6P54276 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.11■□□□□ 0.17
Msh6P54276 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.11■□□□□ 0.17
Msh6P54276 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Gm7848-201ENSMUST00000210739 718 ntBASIC16.11■□□□□ 0.17
Msh6P54276 Gm45770-201ENSMUST00000212105 616 ntBASIC16.11■□□□□ 0.17
Msh6P54276 AC107638.1-201ENSMUST00000213690 1061 ntBASIC16.11■□□□□ 0.17
Msh6P54276 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh6P54276 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Msh6P54276 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.1■□□□□ 0.17
Msh6P54276 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms