Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.8□□□□□ -0.36
Fdft1P53798 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Gm13612-201ENSMUST00000119276 390 ntBASIC12.8□□□□□ -0.36
Fdft1P53798 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.8□□□□□ -0.36
Fdft1P53798 Gm7287-201ENSMUST00000205267 602 ntBASIC12.8□□□□□ -0.36
Fdft1P53798 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.8□□□□□ -0.36
Fdft1P53798 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.8□□□□□ -0.36
Fdft1P53798 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Fdft1P53798 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Fdft1P53798 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fdft1P53798 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Fdft1P53798 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.79□□□□□ -0.36
Fdft1P53798 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.79□□□□□ -0.36
Fdft1P53798 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.79□□□□□ -0.36
Fdft1P53798 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.79□□□□□ -0.36
Fdft1P53798 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.79□□□□□ -0.36
Fdft1P53798 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Fdft1P53798 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.79□□□□□ -0.36
Fdft1P53798 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.79□□□□□ -0.36
Fdft1P53798 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.79□□□□□ -0.36
Fdft1P53798 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.79□□□□□ -0.36
Fdft1P53798 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Fdft1P53798 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.79□□□□□ -0.36
Fdft1P53798 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Fdft1P53798 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Fdft1P53798 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fdft1P53798 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Fdft1P53798 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fdft1P53798 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms