Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdx1P52946 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Pdx1P52946 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdx1P52946 Gm11591-201ENSMUST00000120063 702 ntBASIC12.65□□□□□ -0.38
Pdx1P52946 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.65□□□□□ -0.38
Pdx1P52946 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.65□□□□□ -0.38
Pdx1P52946 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.65□□□□□ -0.38
Pdx1P52946 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.65□□□□□ -0.38
Pdx1P52946 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Gm43438-201ENSMUST00000198133 379 ntBASIC12.65□□□□□ -0.38
Pdx1P52946 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.65□□□□□ -0.38
Pdx1P52946 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Snora73a-201ENSMUST00000082453 205 ntBASIC12.65□□□□□ -0.38
Pdx1P52946 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pdx1P52946 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.65□□□□□ -0.38
Pdx1P52946 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pdx1P52946 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.65□□□□□ -0.38
Pdx1P52946 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pdx1P52946 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pdx1P52946 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Pdx1P52946 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.65□□□□□ -0.38
Pdx1P52946 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdx1P52946 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.65□□□□□ -0.38
Pdx1P52946 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pdx1P52946 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.65□□□□□ -0.39
Pdx1P52946 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.64□□□□□ -0.39
Pdx1P52946 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pdx1P52946 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.64□□□□□ -0.39
Pdx1P52946 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.64□□□□□ -0.39
Pdx1P52946 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.64□□□□□ -0.39
Pdx1P52946 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.64□□□□□ -0.39
Pdx1P52946 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Pdx1P52946 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.64□□□□□ -0.39
Pdx1P52946 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Gm27514-201ENSMUST00000183692 110 ntBASIC12.64□□□□□ -0.39
Pdx1P52946 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.64□□□□□ -0.39
Pdx1P52946 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.64□□□□□ -0.39
Pdx1P52946 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.64□□□□□ -0.39
Pdx1P52946 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.64□□□□□ -0.39
Pdx1P52946 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.64□□□□□ -0.39
Pdx1P52946 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pdx1P52946 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pdx1P52946 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.64□□□□□ -0.39
Pdx1P52946 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pdx1P52946 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdx1P52946 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.63□□□□□ -0.39
Pdx1P52946 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pdx1P52946 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms