Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm44124-201ENSMUST00000204159 472 ntBASIC10.62□□□□□ -0.71
Nkx2-1P50220 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Gm5867-201ENSMUST00000063197 592 ntBASIC10.62□□□□□ -0.71
Nkx2-1P50220 Gm24447-201ENSMUST00000083977 338 ntBASIC10.62□□□□□ -0.71
Nkx2-1P50220 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.61□□□□□ -0.71
Nkx2-1P50220 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.61□□□□□ -0.71
Nkx2-1P50220 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.61□□□□□ -0.71
Nkx2-1P50220 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.61□□□□□ -0.71
Nkx2-1P50220 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Gm15920-201ENSMUST00000118998 402 ntBASIC10.61□□□□□ -0.71
Nkx2-1P50220 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Mir6956-201ENSMUST00000183598 62 ntBASIC10.61□□□□□ -0.71
Nkx2-1P50220 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.61□□□□□ -0.71
Nkx2-1P50220 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.61□□□□□ -0.71
Nkx2-1P50220 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.61□□□□□ -0.71
Nkx2-1P50220 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.61□□□□□ -0.71
Nkx2-1P50220 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-1P50220 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.61□□□□□ -0.71
Nkx2-1P50220 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Daam2-202ENSMUST00000224595 1926 ntBASIC10.6□□□□□ -0.71
Nkx2-1P50220 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-1P50220 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-1P50220 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms