Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.32□□□□□ -0.44
Prox1P48437 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.32□□□□□ -0.44
Prox1P48437 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.32□□□□□ -0.44
Prox1P48437 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Prox1P48437 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.32□□□□□ -0.44
Prox1P48437 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Gm5161-201ENSMUST00000075243 853 ntBASIC12.32□□□□□ -0.44
Prox1P48437 Gm24447-201ENSMUST00000083977 338 ntBASIC12.32□□□□□ -0.44
Prox1P48437 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Prox1P48437 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Prox1P48437 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.32□□□□□ -0.44
Prox1P48437 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.31□□□□□ -0.44
Prox1P48437 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.31□□□□□ -0.44
Prox1P48437 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.31□□□□□ -0.44
Prox1P48437 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.31□□□□□ -0.44
Prox1P48437 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Prox1P48437 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.31□□□□□ -0.44
Prox1P48437 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Gm13223-201ENSMUST00000118609 747 ntBASIC12.31□□□□□ -0.44
Prox1P48437 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Prox1P48437 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.31□□□□□ -0.44
Prox1P48437 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.31□□□□□ -0.44
Prox1P48437 Gm5866-201ENSMUST00000177881 973 ntBASIC12.31□□□□□ -0.44
Prox1P48437 Mir7684-201ENSMUST00000183858 60 ntBASIC12.31□□□□□ -0.44
Prox1P48437 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.31□□□□□ -0.44
Prox1P48437 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.31□□□□□ -0.44
Prox1P48437 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Prox1P48437 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Prox1P48437 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Prox1P48437 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Prox1P48437 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Prox1P48437 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Prox1P48437 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.3□□□□□ -0.44
Prox1P48437 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.3□□□□□ -0.44
Prox1P48437 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.3□□□□□ -0.44
Prox1P48437 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.3□□□□□ -0.44
Prox1P48437 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.3□□□□□ -0.44
Prox1P48437 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.3□□□□□ -0.44
Prox1P48437 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.3□□□□□ -0.44
Prox1P48437 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.3□□□□□ -0.44
Prox1P48437 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.3□□□□□ -0.44
Prox1P48437 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prox1P48437 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms