Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Vps4bP46467 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vps4bP46467 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13□□□□□ -0.33
Vps4bP46467 Gm6210-201ENSMUST00000204734 1942 ntBASIC13□□□□□ -0.33
Vps4bP46467 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13□□□□□ -0.33
Vps4bP46467 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps4bP46467 Gm12291-201ENSMUST00000121627 311 ntBASIC13□□□□□ -0.33
Vps4bP46467 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13□□□□□ -0.33
Vps4bP46467 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Gm17150-201ENSMUST00000165577 381 ntBASIC13□□□□□ -0.33
Vps4bP46467 Gm9002-201ENSMUST00000178437 499 ntBASIC13□□□□□ -0.33
Vps4bP46467 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13□□□□□ -0.33
Vps4bP46467 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vps4bP46467 Gm28693-202ENSMUST00000190758 331 ntBASIC13□□□□□ -0.33
Vps4bP46467 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13□□□□□ -0.33
Vps4bP46467 Gm2495-201ENSMUST00000191160 466 ntBASIC13□□□□□ -0.33
Vps4bP46467 AY702102-202ENSMUST00000194651 1173 ntBASIC13□□□□□ -0.33
Vps4bP46467 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13□□□□□ -0.33
Vps4bP46467 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13□□□□□ -0.33
Vps4bP46467 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vps4bP46467 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps4bP46467 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13□□□□□ -0.33
Vps4bP46467 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4bP46467 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps4bP46467 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vps4bP46467 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps4bP46467 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps4bP46467 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vps4bP46467 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vps4bP46467 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vps4bP46467 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.99□□□□□ -0.33
Vps4bP46467 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.99□□□□□ -0.33
Vps4bP46467 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.99□□□□□ -0.33
Vps4bP46467 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.99□□□□□ -0.33
Vps4bP46467 Gm27701-201ENSMUST00000184498 110 ntBASIC12.99□□□□□ -0.33
Vps4bP46467 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.99□□□□□ -0.33
Vps4bP46467 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps4bP46467 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps4bP46467 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4bP46467 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms