Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.2□□□□□ -0.3
Msh2P43247 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.2□□□□□ -0.3
Msh2P43247 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Gm12928-201ENSMUST00000117115 573 ntBASIC13.2□□□□□ -0.3
Msh2P43247 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.2□□□□□ -0.3
Msh2P43247 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.2□□□□□ -0.3
Msh2P43247 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Msh2P43247 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.2□□□□□ -0.3
Msh2P43247 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.2□□□□□ -0.3
Msh2P43247 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.2□□□□□ -0.3
Msh2P43247 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.2□□□□□ -0.3
Msh2P43247 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.2□□□□□ -0.3
Msh2P43247 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Msh2P43247 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Msh2P43247 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Msh2P43247 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh2P43247 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.19□□□□□ -0.3
Msh2P43247 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Msh2P43247 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.19□□□□□ -0.3
Msh2P43247 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Msh2P43247 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.19□□□□□ -0.3
Msh2P43247 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Msh2P43247 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Gm8463-201ENSMUST00000208573 613 ntBASIC13.19□□□□□ -0.3
Msh2P43247 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.19□□□□□ -0.3
Msh2P43247 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.19□□□□□ -0.3
Msh2P43247 Gm26315-201ENSMUST00000083890 321 ntBASIC13.19□□□□□ -0.3
Msh2P43247 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Msh2P43247 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.19□□□□□ -0.3
Msh2P43247 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.19□□□□□ -0.3
Msh2P43247 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msh2P43247 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.18□□□□□ -0.3
Msh2P43247 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Msh2P43247 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Msh2P43247 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.18□□□□□ -0.3
Msh2P43247 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Msh2P43247 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.18□□□□□ -0.3
Msh2P43247 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Msh2P43247 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Msh2P43247 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Msh2P43247 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Msh2P43247 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.18□□□□□ -0.3
Msh2P43247 Gm5745-201ENSMUST00000183748 313 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 123.7 ms