Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Gm19166-201ENSMUST00000196041 1063 ntBASIC18.2■□□□□ 0.5
Kdm5cP41230 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kdm5cP41230 Gm5879-201ENSMUST00000089501 1209 ntBASIC18.2■□□□□ 0.5
Kdm5cP41230 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Kdm5cP41230 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kdm5cP41230 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kdm5cP41230 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kdm5cP41230 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kdm5cP41230 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kdm5cP41230 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Gm9924-202ENSMUST00000192760 2311 ntBASIC18.19■□□□□ 0.5
Kdm5cP41230 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
Kdm5cP41230 Gm13668-201ENSMUST00000119237 1001 ntBASIC18.19■□□□□ 0.5
Kdm5cP41230 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Kdm5cP41230 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Kdm5cP41230 Gm25951-201ENSMUST00000175330 64 ntBASIC18.19■□□□□ 0.5
Kdm5cP41230 Gm28388-201ENSMUST00000186262 437 ntBASIC18.19■□□□□ 0.5
Kdm5cP41230 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC18.19■□□□□ 0.5
Kdm5cP41230 Gm43858-201ENSMUST00000199418 1778 ntBASIC18.19■□□□□ 0.5
Kdm5cP41230 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC18.19■□□□□ 0.5
Kdm5cP41230 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Kdm5cP41230 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kdm5cP41230 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Kdm5cP41230 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Kdm5cP41230 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC18.18■□□□□ 0.5
Kdm5cP41230 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Kdm5cP41230 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Kdm5cP41230 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Gm42629-201ENSMUST00000199063 1102 ntBASIC18.18■□□□□ 0.5
Kdm5cP41230 Gm44270-201ENSMUST00000203084 1234 ntBASIC18.18■□□□□ 0.5
Kdm5cP41230 Gm44158-201ENSMUST00000203881 505 ntBASIC18.18■□□□□ 0.5
Kdm5cP41230 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC18.18■□□□□ 0.5
Kdm5cP41230 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Kdm5cP41230 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kdm5cP41230 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Kdm5cP41230 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Gm8731-201ENSMUST00000118088 412 ntBASIC18.17■□□□□ 0.5
Kdm5cP41230 Gm14585-201ENSMUST00000120713 634 ntBASIC18.17■□□□□ 0.5
Kdm5cP41230 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Gm20392-201ENSMUST00000173047 701 ntBASIC18.17■□□□□ 0.5
Kdm5cP41230 Gm37299-201ENSMUST00000193951 826 ntBASIC18.17■□□□□ 0.5
Kdm5cP41230 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Kdm5cP41230 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Gm44329-201ENSMUST00000197469 112 ntBASIC18.17■□□□□ 0.5
Kdm5cP41230 Gm43186-201ENSMUST00000198130 824 ntBASIC18.17■□□□□ 0.5
Kdm5cP41230 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC18.17■□□□□ 0.5
Kdm5cP41230 Prrxl1-205ENSMUST00000228878 723 ntBASIC18.17■□□□□ 0.5
Kdm5cP41230 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kdm5cP41230 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Kdm5cP41230 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kdm5cP41230 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms