Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm3433-201ENSMUST00000210149 1058 ntBASIC16.51■□□□□ 0.23
Col18a1P39061 Gm18499-201ENSMUST00000220808 1021 ntBASIC16.51■□□□□ 0.23
Col18a1P39061 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col18a1P39061 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC16.51■□□□□ 0.23
Col18a1P39061 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col18a1P39061 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col18a1P39061 Gm43807-201ENSMUST00000200678 1781 ntBASIC16.51■□□□□ 0.23
Col18a1P39061 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col18a1P39061 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col18a1P39061 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Col18a1P39061 AC126257.1-201ENSMUST00000213195 1536 ntBASIC16.5■□□□□ 0.23
Col18a1P39061 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col18a1P39061 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.5■□□□□ 0.23
Col18a1P39061 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Gm24791-201ENSMUST00000104284 131 ntBASIC16.5■□□□□ 0.23
Col18a1P39061 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC16.5■□□□□ 0.23
Col18a1P39061 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC16.5■□□□□ 0.23
Col18a1P39061 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC16.5■□□□□ 0.23
Col18a1P39061 Gm9507-202ENSMUST00000180157 654 ntBASIC16.5■□□□□ 0.23
Col18a1P39061 Gm37981-201ENSMUST00000194280 535 ntBASIC16.5■□□□□ 0.23
Col18a1P39061 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC16.5■□□□□ 0.23
Col18a1P39061 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Olfr584-201ENSMUST00000098210 964 ntBASIC16.5■□□□□ 0.23
Col18a1P39061 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col18a1P39061 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC16.5■□□□□ 0.23
Col18a1P39061 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col18a1P39061 AC130823.1-201ENSMUST00000228929 1549 ntBASIC16.5■□□□□ 0.23
Col18a1P39061 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col18a1P39061 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Gm5380-201ENSMUST00000119296 2136 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Col18a1P39061 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Col18a1P39061 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Gm11660-201ENSMUST00000120955 412 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 Gm12453-201ENSMUST00000121981 331 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col18a1P39061 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col18a1P39061 Gm17192-201ENSMUST00000169031 511 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 Gm42816-201ENSMUST00000198433 325 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC16.49■□□□□ 0.23
Col18a1P39061 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 n-R5s185-201ENSMUST00000083953 119 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col18a1P39061 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 AC166836.1-201ENSMUST00000219933 1795 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Col18a1P39061 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col18a1P39061 Gm24248-201ENSMUST00000157321 322 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 Gm22146-201ENSMUST00000157397 288 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Gm45592-201ENSMUST00000209605 1043 ntBASIC16.49■□□□□ 0.23
Col18a1P39061 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col18a1P39061 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col18a1P39061 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col18a1P39061 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col18a1P39061 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col18a1P39061 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col18a1P39061 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col18a1P39061 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col18a1P39061 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col18a1P39061 Gm4900-201ENSMUST00000222046 1628 ntBASIC16.48■□□□□ 0.23
Col18a1P39061 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Col18a1P39061 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col18a1P39061 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col18a1P39061 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col18a1P39061 Gm13351-201ENSMUST00000118087 414 ntBASIC16.48■□□□□ 0.23
Col18a1P39061 Gm5555-201ENSMUST00000120352 1111 ntBASIC16.48■□□□□ 0.23
Col18a1P39061 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC16.48■□□□□ 0.23
Col18a1P39061 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col18a1P39061 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col18a1P39061 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col18a1P39061 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms