Protein–RNA interactions for Protein: P33622

Apoc3, Apolipoprotein C-III, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc3P33622 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Apoc3P33622 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Apoc3P33622 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Apoc3P33622 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Apoc3P33622 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Apoc3P33622 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Apoc3P33622 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Apoc3P33622 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Apoc3P33622 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Apoc3P33622 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.77□□□□□ -0.68
Apoc3P33622 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Apoc3P33622 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Apoc3P33622 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Apoc3P33622 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Apoc3P33622 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Apoc3P33622 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.77□□□□□ -0.68
Apoc3P33622 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Apoc3P33622 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Apoc3P33622 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.77□□□□□ -0.69
Apoc3P33622 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Apoc3P33622 Gm11764-201ENSMUST00000120221 623 ntBASIC10.77□□□□□ -0.69
Apoc3P33622 Gm29518-201ENSMUST00000190858 372 ntBASIC10.77□□□□□ -0.69
Apoc3P33622 Gm37055-201ENSMUST00000191866 133 ntBASIC10.77□□□□□ -0.69
Apoc3P33622 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.77□□□□□ -0.69
Apoc3P33622 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Apoc3P33622 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Apoc3P33622 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Apoc3P33622 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Apoc3P33622 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Apoc3P33622 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Apoc3P33622 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Apoc3P33622 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Apoc3P33622 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.76□□□□□ -0.69
Apoc3P33622 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.76□□□□□ -0.69
Apoc3P33622 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.76□□□□□ -0.69
Apoc3P33622 Gm16198-201ENSMUST00000118766 670 ntBASIC10.76□□□□□ -0.69
Apoc3P33622 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.76□□□□□ -0.69
Apoc3P33622 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Apoc3P33622 Gm27920-201ENSMUST00000183953 96 ntBASIC10.76□□□□□ -0.69
Apoc3P33622 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.76□□□□□ -0.69
Apoc3P33622 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Apoc3P33622 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Apoc3P33622 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Apoc3P33622 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Apoc3P33622 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Apoc3P33622 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.75□□□□□ -0.69
Apoc3P33622 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Apoc3P33622 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.75□□□□□ -0.69
Apoc3P33622 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Apoc3P33622 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms